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Home >> Plant Biotechnology and Genomics >> Gene Transfer Methods in Plants >>Neomycin Phosphotransferase Gene (nptll).

Neomycin Phosphotransferase Gene (nptll).
This gene is used both as a selectable and a scoreable marker in experiments involving transfer of genes leading to the production of transgenic plants. It imparts kanamycin resistance, so that the transformed tissue can be selected on kanamycin. An assay for NPTII enzyme is also used to detect its presence in transformed tissue or transgenic plants. The gene for NPTII enzyme is often used with nos promoter, which drives its synthesis. In some cases, nptll gene had adverse effect on theexpression of the desirable gene introduced (eg. bt2 gene for insect resistance; see next chapter), so that alternative approaches for  improving itsexpression had to be used.

For an enzyme assay of NPTII, the enzyme is first fractionated using non-denaturing polyacrylamide gel electrophoresis (PAGE). Since the enzyme detoxifies kanamycin by phosphorylation, radioactively labelled ATP (p32) is used with kanamycin in an agar layer, which is used' to cover the gel containing the enzyme. The whole set is incubated at 35°C and the phosphorylation leading to incorporation of 32p in kanamycin can be detected by autoradiography. As indicated in, a more convenient and easier enzyme assay can be conducted using dot blots of cell extracts (no DNA or enzyme extraction is necessary) obtained on a filter. The filter with dot blots is incubated with the substrate (kanamycin) and is then subjected to autoradiography to detect the presence of NPTII enzyme.

 

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