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Home >> Industrial and Microbial Biotechnology >> Protein and Enzymes Engineering >>Catalytic Diversity

Catalytic Diversity
Estimates of plant, animal and microbial diversity are in the order of 107 to 108 species (10 to 100 million). On an average, 104 to 105 open reading frames (ORFs) are present in a genome, thus giving 1011 to 1013 distinct functional sequences, many of them encoding enzymes. This number is substantially reduced by high homology between enzymes from related and unrelated organisms, but make the core biological resource, sometimes described as sequence space.

This sequence space has been used by nature to give a limited diversity as against the theoretical possibility of getting 20100 polypeptides (a polypeptide of 100 amino acids using each of the 20 essential amino acids). Even from the limited diversity in nature, only a small proportion has been utilized, since only a limited number of species has been investigated, and even those studied are not readily accessible.

In view of the above, new methods have been developed to obtain a much wider range of enzymes outside the natural evolutionary boundaries.
These methods include the following: (i) chemical, site-directed and random muta­genesis in the natural sequences; (ii) gene and domain swapping, DNA shuffling and other forms of combinatorial genomics.

 

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