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Home >> Industrial and Microbial Biotechnology >> Protein and Enzymes Engineering >>Breeding a Better Catalyst Using Random Events

Breeding a Better Catalyst Using Random Events (evolutionary protein design)
Laboratory protein design methods make use of random mutagenesis (rather than site directed mutagenesis used in rational redesigning) and gene recombination followed by high-through­put screening (HTS). However, in enzyme engineering, combinatorial chemistry involving organic synthesis of molecules, which is used in drug development, is not utilized. Instead, molecules are produced in recombinant cells and decoupled from their biological functions, so that they may either be used for reactions and substrates not encountered in nature, or else are capable of functioning under highly unusual conditions. Moreover, they can be bred for multiple traits simultaneously by changing the conditions of screen/selection, thus making this technique particularly suitable for engineering industrial biocatalysts.

Naturally occurring mutants
Mutagenesis and selection can be effectively utilized for improving a specific property of an enzyme. Following are some examples: (i) E. coli anthranilate synthetase enzyme is normally sensitive to tryptophan inhibition due to feedback inhibition as shown in diagram. An MTR2 mutation of E. coli was found to possess an altered form of enzyme anthranilate synthetase that is insensitive to tryptophan inhibition. They may help in continuous synthesis of tryptophan without any inhibition by tryptophan accumulated as a product. (ii) Xanthine dehydrogenase enzyme oxidizes 2 hydroxy-purine at position 8, but a mutant has been isolated, which oxidizes 2 dydroxy-purine at position 6. (iii) Lactate dehydrogenase (LDH) from a bacterial system was modified to malate dehydrogenase by a natural mutation leading to a single amino acid substitution (Gln102 Arg; see later in this chapter).

In the above and other cases of naturally occurring mutant enzymes, single amino acid modification or addition/deletion has been observed. However, if improvement requires changes in several amino acids, such a mutant will be rare or nonexistent and modifications of this type will be possible only through gene modification techniques discussed in the following section.

 

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