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Home >> Dictionary of Bioinformatics, Biochemistry, Biotechnology >> Monte Carlo Algorithms - Multimensional Protein Identification Technology
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Monophyletic
Refers to a group of organisms that are assumed to have originated from the same ancestor.
Monoploid
One chromosome set.
Monoprotic acid
An acid containing only one dissociable proton.
Monosaccharide A carbohydrate containing a single sugar unit.
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Monosomic
Diploid cells that lack one of a homologous pair of chromosome.
Monounsaturated fatty acid
A fatty acid with a single double bond between carbon atoms.
Monounsaturates
Oils that contain monounsaturated fatty acids.
Monovalent
An atom with only one free electron available for binding in its highest energy shell.
Monozygotic
Describes identical twins produced as a result of splitting of a single embryo at an early stage.
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Monte Carlo Algorithms
Use of random numbers to solve problems. It is used in protein structure calculation to explore conformations.
Morgan, T.H.
(1866-1945) A geneticist awarded the Nobel Prize in Medicine for his work on the genetics of Drosophila melanogaster. He confirmed Mendelian laws of heredity and his work gave rise to the concept of the gene.
Morphogen
A substance that induces the development of form or structure in an organism as well as particular cell types based on its concentration.
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Morphogenesis
The development of form and structure in an organism brought about by growth and differentiation.
Morphology
(Gr. morphe, form + logos, discourse). 1. The study of form and its development. 2. The shape, form, external structure or arrangement.
Morpheme
The quantitative description of anatomical structure, chemical and biochemical composition, and material properties of an intact organism. This includes its genome, proteome, cell, tissue and organ structures and the whole intact being.
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Morphometry
The measurement of shape, structure and form that is used in variety of disciplines, including environmental studies, geology, imaging and cell biology.
Morula
A globular solid mass of cells formed by the cleavage of a zygote that precedes the blastula.
Mos oncogene
An oncogene found in a retrovirus that causes sarcomas in mice. The term is an acronym for Moloney sarcoma virus.
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Mosaic
1. An embryo or organism in which all cells do not carry identical genes. 2. A transgenic animal in which the transgene is present in only a proportion of the cells or tissues.
Mosaic genes
Genes comprised of domains from different sources.
Mosaicism
The property of a tissue as a mixture of clonal populations of cells. According to the Lyon effect, only one X chromosome will be expressed in one cell lineage. The presence of cells with different X chromosome activated in a cell population indicates a mixture of clones. If the same X chromosome is always active. it indicates the clonal origin of tumour cells.
Mother plant
See donor plant.
Motif
A conserved element of a protein sequence alignment that generally correlates with a specific function. A motif is generated from a local multiple protein sequence alignment that corresponds to a region whose function or structure is known. Since it is conserved, it can predict any sub sequent occurrence of such a structural/function region in any other protein sequence.
β-α-a-b motif
A supersecondary structure in proteins in which two parallel b-strands are separated by an a-helix.
Motor protein
A protein that uses the energy obtained from nucleoside triphosphate hydrolysis to move itself along a protein filament or a polymeric molecule.
mRNA
See messenger RNA.
mRNA exporter
A heterodimeric protein that binds to mRNA-containing ribonucleo-protein particles (mRNPs). It interacts with nucleoporins in the nuclear pore complex and directs the export of mRNPs from the cytoplasm to the nucleus.
mRNA surveillance
A collective term to refer to cellular mechanisms that block translation of improperly processed mRNA molecules.
MRUs
minimum recognition units. See dabs.
Msr, msd
Loci that encode an unusual RNA-DNA hybrid. The RNA transcribed from msr is covalently linked to msd DNA. This type of structure is found in myxobacteria and in the soil bacterium Stigmatella aurantiace.
mtDNA
See Mitochondrial DNA.
MTOC
See Microtubule organising center.
Mucopoly-saccharide
An older term for a glycosaminoglycan.
Mucosal-associated lymphoid tissue (MALT)
Collections of lymphoid cells found along the mucus membranes of the respiratory, digestive and urogenital tracts.
Mucoviscoidosis
Increased viscosity of pancreatic exocrine secretions.
Mucus cells A type of cells present in gastric glands that secrete gastric mucus.
MuD phage
A variant of the bacteriophage Mu engineered as a cloning vector for determining the promoter activity using b-galactosidase as a reporter gene.
Mullis, Kary
(b.1944) An American biochemist who was awarded the Nobel Prize in Chemistry in 1993 for his development of the Polymerase Chain Reaction (PCR), a technique for selective amplification of specific DNA sequence. See PCR.
Multiadhesive matrix proteins
A group of proteins that crosslink the cell membrane to the extracellular matrix by binding to matrix components such as collagen and polysaccharides and to cell-surface receptors. Examples of such proteins are laminin and fibronectin.
Multicopy plasmids
Bacterial plasmids present in more than one copy per cell. For example, pBR322 is a multicopy plasmid, There are usually 50 copies of pBR322 per E.coli genome.
Multidimensional Protein identification Technology (MudPIT)
An unbiased method for rapid and large-scale proteome analysis via multidimensional liquid chromatography, tandem mass spectrometry, and database searching via the SEQUEST algorithm. This method can detect and identify proteins rarely seen in proteome analysis including integral membrane proteins from several cellular compartments and low abudance proteins like transcription factors and protein kinases.
Multidrug resistance (mdr) gene
A gene that confers resistance to the cytotoxic effects of chemotherapeutic drugs such as methotrexate. The mdr genes arise as a result of gene amplification and are present as homogeneously staining regions on chromosome or as extrachromosomal double minutes.
Multidrug resistance protein (MDR protein)
An ABC transporter protein that pumps hydrophobic drugs including anticancer drugs out of the cell.
Multienzyme system
A group of related enzymes that participate in a given metabolic pathway.
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